New PDF release: Cladistics: the theory and practice of parsimony analysis

By Ian J. Kitching

ISBN-10: 0198501382

ISBN-13: 9780198501381

Cladistics goals to reconstruct genealogies in keeping with universal ancestry, hence revealing the phylogenetic relationships among taxa. Its purposes differ from linguistic research to the learn of conservation and biodiversity, and it has develop into a style of selection for comparative stories in all fields of biology. This new version of Cladistics--first released in 1992--reflects the numerous adjustments and advancements that have taken position within the box over the past 5 years, whereas keeping the readability and clarity that made the 1st variation such a success. For all scholars drawn to the systematic relationships between organisms, this booklet presents a state of the art account of the recommendations and techniques of contemporary cladistics, and of the way to place them into perform.

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Additional info for Cladistics: the theory and practice of parsimony analysis

Example text

Can be restricted to a set of three transformations by selecting a particular character order and then to a single sequence by making another choice regarding polarity. (See Chapter 3 for a detailed account of polarity, rooting and optimization). For example, consider that through study of the ontogeny, we have ascertained that not only is absence piesiomorphic bUI also thai the round shape is subsequently transformed into the square shape. The states of this multistate character could now be considered incremental and both the order and polarity could be included as extra information in a cladistic analysis.

1. fea tures absent (0): features present 11) 2. round shape absen t (O~ rou nd shape present h) J. square shape absent lo}, square sha pe pUlsent (1) 4. black pigme nta tion absen t (0); hlllck piWlltllltll tloll presonl (1) 5. 5 Five taxa (V- Z) wi th the featu res shoWII in Fig. 4 Codins method Taxa V W X Y Z A D C 0 0 1 00 11 12 O?? 100 101 110 111 00000 11010 2 3 4 21 22 11001 10110 10101 presence and absence of any character state as a separate character and thus has three columns. Coding method D assumes that all five character 'sta tes' are independent characters.

3 Hicrarchicul character linkage Characters and characte r states will often be coded differently in an analysis of a group of closely related taxa when compared to a more general study that contains these taxa as only one small subgroup. At the more general level, we may be satisfied to code just that information relating to the absence or presence of a feature, whereas at. the less general level we might choose to encode more of the observed variation. Thus, characters and character states can vary in how they are coded at different scales, in other words, character interdepende ncy is affected by hierarchy.

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Cladistics: the theory and practice of parsimony analysis by Ian J. Kitching


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